Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Upb1Q8VC97 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.04■□□□□ 0.8
Upb1Q8VC97 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upb1Q8VC97 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.04■□□□□ 0.8
Upb1Q8VC97 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.04■□□□□ 0.8
Upb1Q8VC97 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.03■□□□□ 0.8
Upb1Q8VC97 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.03■□□□□ 0.8
Upb1Q8VC97 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upb1Q8VC97 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Flg-201ENSMUST00000050758 1488 ntBASIC20.02■□□□□ 0.8
Upb1Q8VC97 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.02■□□□□ 0.8
Upb1Q8VC97 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 BC021767-201ENSMUST00000126387 1716 ntBASIC20.02■□□□□ 0.79
Upb1Q8VC97 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upb1Q8VC97 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Notumos-201ENSMUST00000151998 2659 ntBASIC20.01■□□□□ 0.79
Upb1Q8VC97 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.01■□□□□ 0.79
Upb1Q8VC97 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.01■□□□□ 0.79
Upb1Q8VC97 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upb1Q8VC97 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upb1Q8VC97 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20■□□□□ 0.79
Upb1Q8VC97 Gm11249-201ENSMUST00000117071 859 ntBASIC20■□□□□ 0.79
Upb1Q8VC97 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upb1Q8VC97 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upb1Q8VC97 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upb1Q8VC97 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Upb1Q8VC97 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Upb1Q8VC97 Gm15853-202ENSMUST00000195518 2041 ntBASIC20■□□□□ 0.79
Upb1Q8VC97 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20■□□□□ 0.79
Upb1Q8VC97 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upb1Q8VC97 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.99■□□□□ 0.79
Upb1Q8VC97 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Upb1Q8VC97 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Upb1Q8VC97 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms