Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 MYCNOS-205ENST00000641950 531 ntBASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 KRT18P11-201ENST00000435214 1283 ntBASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.31■□□□□ 0.84
LINC01555Q8NAE3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 Z98882.1-201ENST00000622160 2253 ntBASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 MFSD11-216ENST00000590393 1141 ntBASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LINC01555Q8NAE3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 KRT16P2-201ENST00000414673 1423 ntBASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC01555Q8NAE3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 AC011767.1-201ENST00000617410 1153 ntBASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01555Q8NAE3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 BID-214ENST00000617586 542 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 AC120498.10-201ENST00000621827 505 ntBASIC20.27■□□□□ 0.84
LINC01555Q8NAE3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC01555Q8NAE3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC01555Q8NAE3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms