Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC29.59■■■□□ 2.33
XRN1Q8IZH2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
XRN1Q8IZH2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC29.57■■■□□ 2.32
XRN1Q8IZH2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 GXYLT1P3-201ENST00000453058 1193 ntBASIC29.56■■■□□ 2.32
XRN1Q8IZH2 SNORA78-201ENST00000459373 127 ntBASIC29.56■■■□□ 2.32
XRN1Q8IZH2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
XRN1Q8IZH2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
XRN1Q8IZH2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
XRN1Q8IZH2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
XRN1Q8IZH2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 ECEL1P3-201ENST00000427961 737 ntBASIC29.54■■■□□ 2.32
XRN1Q8IZH2 AC012618.2-201ENST00000428058 849 ntBASIC29.54■■■□□ 2.32
XRN1Q8IZH2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 AC092368.3-202ENST00000574180 1591 ntBASIC29.54■■■□□ 2.32
XRN1Q8IZH2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
XRN1Q8IZH2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 SOX15-203ENST00000570788 1093 ntBASIC29.53■■■□□ 2.32
XRN1Q8IZH2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
XRN1Q8IZH2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
XRN1Q8IZH2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC29.51■■■□□ 2.32
XRN1Q8IZH2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.51■■■□□ 2.32
XRN1Q8IZH2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC29.51■■■□□ 2.32
XRN1Q8IZH2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
XRN1Q8IZH2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 AC139530.1-201ENST00000575312 1977 ntBASIC29.51■■■□□ 2.31
XRN1Q8IZH2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC29.51■■■□□ 2.31
XRN1Q8IZH2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 Z99916.2-201ENST00000604037 246 ntBASIC29.5■■■□□ 2.31
XRN1Q8IZH2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
XRN1Q8IZH2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 MCRIP2P1-201ENST00000394346 511 ntBASIC29.49■■■□□ 2.31
XRN1Q8IZH2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
XRN1Q8IZH2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
XRN1Q8IZH2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms