Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrif1Q8CDD9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrif1Q8CDD9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.22■□□□□ 0.51
Lrif1Q8CDD9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Lrif1Q8CDD9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Lrif1Q8CDD9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrif1Q8CDD9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrif1Q8CDD9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.18■□□□□ 0.5
Lrif1Q8CDD9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrif1Q8CDD9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrif1Q8CDD9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms