Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Gm12527-201ENSMUST00000117967 564 ntBASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Alx1Q8C8B0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Gm20049-201ENSMUST00000219950 730 ntBASIC21.65■■□□□ 1.06
Alx1Q8C8B0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Alx1Q8C8B0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Alx1Q8C8B0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Alx1Q8C8B0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Alx1Q8C8B0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.64■■□□□ 1.06
Alx1Q8C8B0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx1Q8C8B0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx1Q8C8B0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.62■■□□□ 1.05
Alx1Q8C8B0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Dio3-201ENSMUST00000097228 1449 ntBASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.61■■□□□ 1.05
Alx1Q8C8B0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alx1Q8C8B0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alx1Q8C8B0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx1Q8C8B0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms