Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.48■□□□□ 0.39
VcanQ62059 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VcanQ62059 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.48■□□□□ 0.39
VcanQ62059 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.48■□□□□ 0.39
VcanQ62059 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.48■□□□□ 0.39
VcanQ62059 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VcanQ62059 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VcanQ62059 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.47■□□□□ 0.39
VcanQ62059 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VcanQ62059 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VcanQ62059 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.46■□□□□ 0.39
VcanQ62059 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
VcanQ62059 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.46■□□□□ 0.39
VcanQ62059 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VcanQ62059 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VcanQ62059 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VcanQ62059 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.45■□□□□ 0.38
VcanQ62059 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VcanQ62059 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VcanQ62059 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VcanQ62059 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VcanQ62059 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
VcanQ62059 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.44■□□□□ 0.38
VcanQ62059 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Gm42545-201ENSMUST00000202755 922 ntBASIC17.44■□□□□ 0.38
VcanQ62059 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
VcanQ62059 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VcanQ62059 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.43■□□□□ 0.38
VcanQ62059 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.43■□□□□ 0.38
VcanQ62059 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VcanQ62059 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VcanQ62059 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 Gm17807-201ENSMUST00000186869 298 ntBASIC17.43■□□□□ 0.38
VcanQ62059 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VcanQ62059 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VcanQ62059 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VcanQ62059 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.42■□□□□ 0.38
VcanQ62059 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VcanQ62059 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VcanQ62059 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VcanQ62059 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
VcanQ62059 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.42■□□□□ 0.38
VcanQ62059 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VcanQ62059 Gm18669-201ENSMUST00000216049 778 ntBASIC17.42■□□□□ 0.38
VcanQ62059 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VcanQ62059 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.41■□□□□ 0.38
VcanQ62059 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms