Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Znf235Q61116 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.41■□□□□ 0.7
Znf235Q61116 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.41■□□□□ 0.7
Znf235Q61116 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf235Q61116 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.4■□□□□ 0.7
Znf235Q61116 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.4■□□□□ 0.7
Znf235Q61116 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf235Q61116 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf235Q61116 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf235Q61116 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Znf235Q61116 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.4■□□□□ 0.7
Znf235Q61116 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
Znf235Q61116 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf235Q61116 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Znf235Q61116 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Znf235Q61116 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Gm38285-201ENSMUST00000192928 922 ntBASIC19.39■□□□□ 0.69
Znf235Q61116 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.39■□□□□ 0.69
Znf235Q61116 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.39■□□□□ 0.69
Znf235Q61116 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Znf235Q61116 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf235Q61116 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.38■□□□□ 0.69
Znf235Q61116 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.38■□□□□ 0.69
Znf235Q61116 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.38■□□□□ 0.69
Znf235Q61116 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Znf235Q61116 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Znf235Q61116 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf235Q61116 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Znf235Q61116 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.37■□□□□ 0.69
Znf235Q61116 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.37■□□□□ 0.69
Znf235Q61116 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Znf235Q61116 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.37■□□□□ 0.69
Znf235Q61116 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.37■□□□□ 0.69
Znf235Q61116 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf235Q61116 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Znf235Q61116 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.36■□□□□ 0.69
Znf235Q61116 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Znf235Q61116 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf235Q61116 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Znf235Q61116 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.35■□□□□ 0.69
Znf235Q61116 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.35■□□□□ 0.69
Znf235Q61116 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.35■□□□□ 0.69
Znf235Q61116 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Znf235Q61116 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Znf235Q61116 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Znf235Q61116 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Znf235Q61116 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.34■□□□□ 0.69
Znf235Q61116 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Znf235Q61116 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms