Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Gm7290-201ENSMUST00000104990 617 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cd27P41272 Gm12918-201ENSMUST00000120234 636 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Gm15710-201ENSMUST00000121821 636 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.81□□□□□ -0.04
Cd27P41272 Gm5075-201ENSMUST00000196916 622 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cd27P41272 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.81□□□□□ -0.04
Cd27P41272 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cd27P41272 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd27P41272 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cd27P41272 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cd27P41272 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd27P41272 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Cd27P41272 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cd27P41272 Mir5133-201ENSMUST00000174955 77 ntBASIC14.8□□□□□ -0.04
Cd27P41272 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cd27P41272 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd27P41272 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cd27P41272 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd27P41272 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd27P41272 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cd27P41272 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.79□□□□□ -0.04
Cd27P41272 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd27P41272 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.79□□□□□ -0.04
Cd27P41272 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.79□□□□□ -0.04
Cd27P41272 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd27P41272 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd27P41272 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cd27P41272 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd27P41272 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.78□□□□□ -0.04
Cd27P41272 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cd27P41272 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cd27P41272 Gm26524-201ENSMUST00000192339 390 ntBASIC14.78□□□□□ -0.04
Cd27P41272 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cd27P41272 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cd27P41272 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.78□□□□□ -0.04
Cd27P41272 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd27P41272 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd27P41272 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.77□□□□□ -0.04
Cd27P41272 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.77□□□□□ -0.04
Cd27P41272 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cd27P41272 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd27P41272 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cd27P41272 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd27P41272 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd27P41272 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd27P41272 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd27P41272 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Cd27P41272 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Cd27P41272 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.76□□□□□ -0.05
Cd27P41272 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cd27P41272 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd27P41272 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.76□□□□□ -0.05
Cd27P41272 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cd27P41272 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd27P41272 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cd27P41272 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.75□□□□□ -0.05
Cd27P41272 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd27P41272 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms