Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YJR111CYJR111C 852 nt2.3□□□□□ -2.04
VTH1P40438 YOR034C-AYOR034C-A 243 nt2.3□□□□□ -2.04
VTH1P40438 YOL057WYOL057W 2136 nt2.3□□□□□ -2.04
VTH1P40438 SWA2YDR320C 2007 nt2.29□□□□□ -2.04
VTH1P40438 YRB30YGL164C 1323 nt2.28□□□□□ -2.04
VTH1P40438 HSL1YKL101W 4557 nt2.28□□□□□ -2.04
VTH1P40438 MSS116YDR194C 1995 nt2.28□□□□□ -2.04
VTH1P40438 JJJ3YJR097W 519 nt2.28□□□□□ -2.04
VTH1P40438 PDR8YLR266C 2106 nt2.28□□□□□ -2.04
VTH1P40438 HHF2YNL030W 312 nt2.28□□□□□ -2.04
VTH1P40438 YOR114WYOR114W 885 nt2.28□□□□□ -2.04
VTH1P40438 CSH1YBR161W 1131 nt2.28□□□□□ -2.04
VTH1P40438 SKI3YPR189W 4299 nt2.28□□□□□ -2.04
VTH1P40438 YBT1YLL048C 4986 nt2.28□□□□□ -2.04
VTH1P40438 STE12YHR084W 2067 nt2.28□□□□□ -2.05
VTH1P40438 MSH6YDR097C 3729 nt2.28□□□□□ -2.05
VTH1P40438 SPO20YMR017W 1194 nt2.27□□□□□ -2.05
VTH1P40438 YOR097CYOR097C 528 nt2.27□□□□□ -2.05
VTH1P40438 NAT1YDL040C 2565 nt2.27□□□□□ -2.05
VTH1P40438 MDM10YAL010C 1482 nt2.27□□□□□ -2.05
VTH1P40438 MCD1YDL003W 1701 nt2.27□□□□□ -2.05
VTH1P40438 CTF13YMR094W 1437 nt2.27□□□□□ -2.05
VTH1P40438 VMA9YCL005W-A 222 nt2.27□□□□□ -2.05
VTH1P40438 GNT1YOR320C 1476 nt2.26□□□□□ -2.05
VTH1P40438 YBL005W-BYBL005W-B 5268 nt2.26□□□□□ -2.05
VTH1P40438 SWC4YGR002C 1431 nt2.26□□□□□ -2.05
VTH1P40438 ADR1YDR216W 3972 nt2.26□□□□□ -2.05
VTH1P40438 GPP2YER062C 753 nt2.25□□□□□ -2.05
VTH1P40438 YJR023CYJR023C 402 nt2.25□□□□□ -2.05
VTH1P40438 RUF21RUF21 707 nt2.25□□□□□ -2.05
VTH1P40438 ATG34YOL083W 1239 nt2.25□□□□□ -2.05
VTH1P40438 PEX11YOL147C 711 nt2.25□□□□□ -2.05
VTH1P40438 LCB4YOR171C 1875 nt2.25□□□□□ -2.05
VTH1P40438 SLH1YGR271W 5904 nt2.25□□□□□ -2.05
VTH1P40438 COG4YPR105C 2586 nt2.24□□□□□ -2.05
VTH1P40438 SLX9YGR081C 633 nt2.24□□□□□ -2.05
VTH1P40438 SPS18YNL204C 903 nt2.24□□□□□ -2.05
VTH1P40438 SNU114YKL173W 3027 nt2.24□□□□□ -2.05
VTH1P40438 PGS1YCL004W 1566 nt2.23□□□□□ -2.05
VTH1P40438 COQ9YLR201C 783 nt2.23□□□□□ -2.05
VTH1P40438 YNL035CYNL035C 1170 nt2.23□□□□□ -2.05
VTH1P40438 DSE3YOR264W 1293 nt2.23□□□□□ -2.05
VTH1P40438 TRX1YLR043C 312 nt2.22□□□□□ -2.05
VTH1P40438 HUA2YOR284W 732 nt2.22□□□□□ -2.05
VTH1P40438 POC4YPL144W 447 nt2.22□□□□□ -2.05
VTH1P40438 SWD3YBR175W 948 nt2.22□□□□□ -2.05
VTH1P40438 YGL176CYGL176C 1665 nt2.22□□□□□ -2.05
VTH1P40438 OKP1YGR179C 1221 nt2.22□□□□□ -2.05
VTH1P40438 DID4YKL002W 699 nt2.22□□□□□ -2.05
VTH1P40438 YKR047WYKR047W 306 nt2.22□□□□□ -2.05
VTH1P40438 MPP6YNR024W 561 nt2.22□□□□□ -2.05
VTH1P40438 TMA16YOR252W 537 nt2.22□□□□□ -2.05
VTH1P40438 PAC1YOR269W 1485 nt2.21□□□□□ -2.06
VTH1P40438 TOR2YKL203C 7425 nt2.21□□□□□ -2.06
VTH1P40438 YML053CYML053C 639 nt2.21□□□□□ -2.06
VTH1P40438 NAN1YPL126W 2691 nt2.2□□□□□ -2.06
VTH1P40438 TRZ1YKR079C 2517 nt2.2□□□□□ -2.06
VTH1P40438 ATP17YDR377W 306 nt2.2□□□□□ -2.06
VTH1P40438 SDT1YGL224C 843 nt2.2□□□□□ -2.06
VTH1P40438 SEC65YML105C 822 nt2.19□□□□□ -2.06
VTH1P40438 SSN8YNL025C 972 nt2.19□□□□□ -2.06
VTH1P40438 IBD2YNL164C 1056 nt2.19□□□□□ -2.06
VTH1P40438 CPR8YNR028W 927 nt2.19□□□□□ -2.06
VTH1P40438 SOK2YMR016C 2358 nt2.19□□□□□ -2.06
VTH1P40438 GGA1YDR358W 1674 nt2.19□□□□□ -2.06
VTH1P40438 UTP21YLR409C 2820 nt2.19□□□□□ -2.06
VTH1P40438 MSH5YDL154W 2706 nt2.18□□□□□ -2.06
VTH1P40438 YDR203WYDR203W 318 nt2.18□□□□□ -2.06
VTH1P40438 NNT1YLR285W 786 nt2.18□□□□□ -2.06
VTH1P40438 MGA2YIR033W 3342 nt2.18□□□□□ -2.06
VTH1P40438 MDS3YGL197W 4464 nt2.17□□□□□ -2.06
VTH1P40438 YIL102CYIL102C 306 nt2.17□□□□□ -2.06
VTH1P40438 RRI1YDL216C 1323 nt2.17□□□□□ -2.06
VTH1P40438 SRG1SRG1 551 nt2.17□□□□□ -2.06
VTH1P40438 TPM2YIL138C 486 nt2.17□□□□□ -2.06
VTH1P40438 LSM1YJL124C 519 nt2.17□□□□□ -2.06
VTH1P40438 PKR1YMR123W 369 nt2.17□□□□□ -2.06
VTH1P40438 TMA64YDR117C 1698 nt2.16□□□□□ -2.06
VTH1P40438 SSF1YHR066W 1362 nt2.16□□□□□ -2.06
VTH1P40438 SRS2YJL092W 3525 nt2.16□□□□□ -2.06
VTH1P40438 PAU2YEL049W 363 nt2.16□□□□□ -2.06
VTH1P40438 PAU12YGR294W 363 nt2.16□□□□□ -2.06
VTH1P40438 PAU18YLL064C 363 nt2.16□□□□□ -2.06
VTH1P40438 NSE1YLR007W 1011 nt2.16□□□□□ -2.06
VTH1P40438 YML003WYML003W 873 nt2.16□□□□□ -2.06
VTH1P40438 YBL096CYBL096C 309 nt2.16□□□□□ -2.06
VTH1P40438 PAU6YNR076W 363 nt2.16□□□□□ -2.06
VTH1P40438 RPS30BYOR182C 192 nt2.16□□□□□ -2.06
VTH1P40438 PAU24YBR301W 363 nt2.16□□□□□ -2.06
VTH1P40438 SIR3YLR442C 2937 nt2.15□□□□□ -2.06
VTH1P40438 YBP1YBR216C 2025 nt2.15□□□□□ -2.06
VTH1P40438 PRT1YOR361C 2292 nt2.15□□□□□ -2.07
VTH1P40438 MSM1YGR171C 1728 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)E1tH(GUG)E1 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)E2tH(GUG)E2 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)G1tH(GUG)G1 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)G2tH(GUG)G2 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)HtH(GUG)H 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)KtH(GUG)K 72 nt2.15□□□□□ -2.07
VTH1P40438 tH(GUG)MtH(GUG)M 72 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 60.3 ms