Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctla4P09793 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctla4P09793 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ctla4P09793 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Ctla4P09793 Gm12441-201ENSMUST00000121806 588 ntBASIC17.15■□□□□ 0.34
Ctla4P09793 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.15■□□□□ 0.34
Ctla4P09793 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.15■□□□□ 0.34
Ctla4P09793 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctla4P09793 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.15■□□□□ 0.34
Ctla4P09793 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Ctla4P09793 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ctla4P09793 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Ctla4P09793 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.14■□□□□ 0.33
Ctla4P09793 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ctla4P09793 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.14■□□□□ 0.33
Ctla4P09793 Gm26524-201ENSMUST00000192339 390 ntBASIC17.14■□□□□ 0.33
Ctla4P09793 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.14■□□□□ 0.33
Ctla4P09793 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctla4P09793 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ctla4P09793 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctla4P09793 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.13■□□□□ 0.33
Ctla4P09793 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.13■□□□□ 0.33
Ctla4P09793 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ctla4P09793 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctla4P09793 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctla4P09793 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ctla4P09793 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctla4P09793 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctla4P09793 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ctla4P09793 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctla4P09793 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ctla4P09793 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.12■□□□□ 0.33
Ctla4P09793 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctla4P09793 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ctla4P09793 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctla4P09793 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ctla4P09793 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ctla4P09793 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.11■□□□□ 0.33
Ctla4P09793 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.11■□□□□ 0.33
Ctla4P09793 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Rab3c-203ENSMUST00000224180 967 ntBASIC17.11■□□□□ 0.33
Ctla4P09793 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.11■□□□□ 0.33
Ctla4P09793 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ctla4P09793 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctla4P09793 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ctla4P09793 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctla4P09793 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ctla4P09793 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctla4P09793 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctla4P09793 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms