Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Slc4a4O88343 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.82■■□□□ 1.08
Slc4a4O88343 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Slc4a4O88343 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Slc4a4O88343 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Slc4a4O88343 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Slc4a4O88343 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.81■■□□□ 1.08
Slc4a4O88343 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.81■■□□□ 1.08
Slc4a4O88343 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Slc4a4O88343 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc4a4O88343 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Slc4a4O88343 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc4a4O88343 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Gm12896-201ENSMUST00000118430 226 ntBASIC21.8■■□□□ 1.08
Slc4a4O88343 Gm37856-201ENSMUST00000191634 999 ntBASIC21.8■■□□□ 1.08
Slc4a4O88343 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.8■■□□□ 1.08
Slc4a4O88343 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc4a4O88343 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc4a4O88343 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.79■■□□□ 1.08
Slc4a4O88343 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.79■■□□□ 1.08
Slc4a4O88343 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Slc4a4O88343 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc4a4O88343 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.78■■□□□ 1.08
Slc4a4O88343 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.78■■□□□ 1.08
Slc4a4O88343 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.78■■□□□ 1.08
Slc4a4O88343 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc4a4O88343 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc4a4O88343 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc4a4O88343 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Slc4a4O88343 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc4a4O88343 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.77■■□□□ 1.08
Slc4a4O88343 Gm2559-201ENSMUST00000201323 363 ntBASIC21.77■■□□□ 1.08
Slc4a4O88343 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc4a4O88343 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc4a4O88343 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc4a4O88343 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc4a4O88343 Iqck-206ENSMUST00000208658 2891 ntBASIC21.76■■□□□ 1.07
Slc4a4O88343 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc4a4O88343 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc4a4O88343 Gm20760-201ENSMUST00000179197 648 ntBASIC21.76■■□□□ 1.07
Slc4a4O88343 Gm27275-201ENSMUST00000184318 272 ntBASIC21.76■■□□□ 1.07
Slc4a4O88343 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.76■■□□□ 1.07
Slc4a4O88343 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.76■■□□□ 1.07
Slc4a4O88343 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc4a4O88343 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.75■■□□□ 1.07
Slc4a4O88343 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Slc4a4O88343 Trmt13-210ENSMUST00000198454 880 ntBASIC21.75■■□□□ 1.07
Slc4a4O88343 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc4a4O88343 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc4a4O88343 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc4a4O88343 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc4a4O88343 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms