Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 Gm14579-201ENSMUST00000117068 283 ntBASIC16.05■□□□□ 0.16
Dkk1O54908 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 Nespas-201ENSMUST00000143738 1083 ntBASIC16.05■□□□□ 0.16
Dkk1O54908 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Dkk1O54908 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Dkk1O54908 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.05■□□□□ 0.16
Dkk1O54908 Gm37073-201ENSMUST00000192469 1222 ntBASIC16.05■□□□□ 0.16
Dkk1O54908 Gm19080-201ENSMUST00000196082 550 ntBASIC16.05■□□□□ 0.16
Dkk1O54908 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC16.05■□□□□ 0.16
Dkk1O54908 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.05■□□□□ 0.16
Dkk1O54908 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Dkk1O54908 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Dkk1O54908 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Dkk1O54908 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Dkk1O54908 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Dkk1O54908 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Dkk1O54908 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Dkk1O54908 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Gm7430-201ENSMUST00000193824 1144 ntBASIC16.04■□□□□ 0.16
Dkk1O54908 AC160962.2-201ENSMUST00000224761 632 ntBASIC16.04■□□□□ 0.16
Dkk1O54908 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Dkk1O54908 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Dkk1O54908 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Dkk1O54908 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.03■□□□□ 0.16
Dkk1O54908 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Gm22709-201ENSMUST00000116893 111 ntBASIC16.03■□□□□ 0.16
Dkk1O54908 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.03■□□□□ 0.16
Dkk1O54908 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.03■□□□□ 0.16
Dkk1O54908 Gm37179-201ENSMUST00000194862 823 ntBASIC16.03■□□□□ 0.16
Dkk1O54908 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Dkk1O54908 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.03■□□□□ 0.16
Dkk1O54908 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Dkk1O54908 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Dkk1O54908 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.03■□□□□ 0.16
Dkk1O54908 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Dkk1O54908 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Dkk1O54908 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.02■□□□□ 0.16
Dkk1O54908 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.02■□□□□ 0.16
Dkk1O54908 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC16.02■□□□□ 0.16
Dkk1O54908 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.02■□□□□ 0.16
Dkk1O54908 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC16.02■□□□□ 0.16
Dkk1O54908 Gm43222-201ENSMUST00000199013 603 ntBASIC16.02■□□□□ 0.16
Dkk1O54908 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.02■□□□□ 0.16
Dkk1O54908 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Dkk1O54908 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.02■□□□□ 0.15
Dkk1O54908 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dkk1O54908 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dkk1O54908 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dkk1O54908 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.01■□□□□ 0.15
Dkk1O54908 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Dkk1O54908 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.01■□□□□ 0.15
Dkk1O54908 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.01■□□□□ 0.15
Dkk1O54908 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.01■□□□□ 0.15
Dkk1O54908 AC139323.1-201ENSMUST00000223370 1040 ntBASIC16.01■□□□□ 0.15
Dkk1O54908 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dkk1O54908 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dkk1O54908 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Dkk1O54908 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dkk1O54908 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms