Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1S4R1E0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1S4R1E0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Gm27801-201ENSMUST00000184174 223 ntBASIC16.77■□□□□ 0.28
H2afb1S4R1E0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1S4R1E0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
H2afb1S4R1E0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H2afb1S4R1E0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2afb1S4R1E0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1S4R1E0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms