Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CtsfQ9R013 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CtsfQ9R013 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CtsfQ9R013 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CtsfQ9R013 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CtsfQ9R013 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CtsfQ9R013 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CtsfQ9R013 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.08■□□□□ 0.81
CtsfQ9R013 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CtsfQ9R013 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.08■□□□□ 0.81
CtsfQ9R013 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CtsfQ9R013 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CtsfQ9R013 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CtsfQ9R013 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CtsfQ9R013 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.08■□□□□ 0.8
CtsfQ9R013 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CtsfQ9R013 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CtsfQ9R013 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.07■□□□□ 0.8
CtsfQ9R013 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CtsfQ9R013 Gm2559-201ENSMUST00000201323 363 ntBASIC20.07■□□□□ 0.8
CtsfQ9R013 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.07■□□□□ 0.8
CtsfQ9R013 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CtsfQ9R013 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CtsfQ9R013 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.07■□□□□ 0.8
CtsfQ9R013 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CtsfQ9R013 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CtsfQ9R013 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CtsfQ9R013 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CtsfQ9R013 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.06■□□□□ 0.8
CtsfQ9R013 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CtsfQ9R013 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CtsfQ9R013 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.05■□□□□ 0.8
CtsfQ9R013 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CtsfQ9R013 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.05■□□□□ 0.8
CtsfQ9R013 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.05■□□□□ 0.8
CtsfQ9R013 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.05■□□□□ 0.8
CtsfQ9R013 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CtsfQ9R013 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.04■□□□□ 0.8
CtsfQ9R013 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Golph3-205ENSMUST00000228671 2842 ntBASIC20.04■□□□□ 0.8
CtsfQ9R013 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CtsfQ9R013 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.04■□□□□ 0.8
CtsfQ9R013 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CtsfQ9R013 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CtsfQ9R013 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.03■□□□□ 0.8
CtsfQ9R013 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CtsfQ9R013 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.03■□□□□ 0.8
CtsfQ9R013 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CtsfQ9R013 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Dio3-201ENSMUST00000097228 1449 ntBASIC20.02■□□□□ 0.8
CtsfQ9R013 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CtsfQ9R013 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Gm5643-201ENSMUST00000117081 966 ntBASIC20.02■□□□□ 0.8
CtsfQ9R013 Mir7071-201ENSMUST00000184847 69 ntBASIC20.02■□□□□ 0.8
CtsfQ9R013 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.02■□□□□ 0.8
CtsfQ9R013 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CtsfQ9R013 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CtsfQ9R013 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
CtsfQ9R013 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms