Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn5Q9JL35 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.86■□□□□ 0.93
Hmgn5Q9JL35 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn5Q9JL35 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn5Q9JL35 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.83■□□□□ 0.93
Hmgn5Q9JL35 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn5Q9JL35 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn5Q9JL35 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Gm15820-201ENSMUST00000201566 728 ntBASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn5Q9JL35 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn5Q9JL35 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hmgn5Q9JL35 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn5Q9JL35 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn5Q9JL35 Gm22238-201ENSMUST00000175222 88 ntBASIC20.79■□□□□ 0.92
Hmgn5Q9JL35 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms