Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 AC061975.6-201ENST00000579045 1553 ntBASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 LINC01023-201ENST00000606054 436 ntBASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 ANOS2P-203ENST00000472227 1816 ntBASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 KRT18P21-201ENST00000515767 1272 ntBASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM43Q96BQ3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM43Q96BQ3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM43Q96BQ3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM43Q96BQ3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 KRT17P3-201ENST00000420566 1262 ntBASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM43Q96BQ3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 PNMA6B-201ENST00000538162 1200 ntBASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM43Q96BQ3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM43Q96BQ3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 AC092068.2-201ENST00000590491 1708 ntBASIC23.11■■□□□ 1.29
TRIM43Q96BQ3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 BX088651.1-201ENST00000540551 451 ntBASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM43Q96BQ3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms