Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Gm5408-201ENSMUST00000197998 747 ntBASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb2Q91Y00 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb2Q91Y00 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.67■□□□□ 0.74
Pcdhb2Q91Y00 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb2Q91Y00 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gm13148-201ENSMUST00000118892 745 ntBASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Pcdhb2Q91Y00 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb2Q91Y00 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb2Q91Y00 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhb2Q91Y00 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb2Q91Y00 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb2Q91Y00 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb2Q91Y00 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb2Q91Y00 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 141.9 ms