Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 UBE2DNL-204ENST00000602536 740 ntBASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01555Q8NAE3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC01555Q8NAE3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 AC016769.1-201ENST00000409132 1010 ntBASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 KRT18P20-201ENST00000548986 1279 ntBASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LINC01555Q8NAE3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 AL137784.2-201ENST00000607332 1000 ntBASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 AC008175.2-201ENST00000612840 297 ntBASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.34■□□□□ 0.85
LINC01555Q8NAE3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 POU5F1P4-201ENST00000413175 1085 ntBASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC01555Q8NAE3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC01555Q8NAE3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.33■□□□□ 0.84
LINC01555Q8NAE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC01555Q8NAE3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 AC004911.1-201ENST00000416316 871 ntBASIC20.32■□□□□ 0.84
LINC01555Q8NAE3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms