Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ebf4Q8K4J2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ebf4Q8K4J2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ebf4Q8K4J2 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ebf4Q8K4J2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf4Q8K4J2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Gm5921-201ENSMUST00000075898 882 ntBASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ebf4Q8K4J2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf4Q8K4J2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.85■□□□□ 0.29
Ebf4Q8K4J2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf4Q8K4J2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms