Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp6nlQ80XC3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp6nlQ80XC3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Mir5122-201ENSMUST00000175004 89 ntBASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp6nlQ80XC3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Gm11643-201ENSMUST00000119578 864 ntBASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp6nlQ80XC3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp6nlQ80XC3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Usp6nlQ80XC3 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp6nlQ80XC3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms