Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC33.25■■■□□ 2.91
Rtl1Q7M732 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
Rtl1Q7M732 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Rtl1Q7M732 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Rtl1Q7M732 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rtl1Q7M732 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Rtl1Q7M732 Gm11927-201ENSMUST00000118472 759 ntBASIC33.22■■■□□ 2.91
Rtl1Q7M732 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rtl1Q7M732 Gm13158-201ENSMUST00000122007 736 ntBASIC33.22■■■□□ 2.91
Rtl1Q7M732 Alkbh1-212ENSMUST00000185301 408 ntBASIC33.22■■■□□ 2.91
Rtl1Q7M732 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC33.22■■■□□ 2.91
Rtl1Q7M732 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rtl1Q7M732 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtl1Q7M732 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Rtl1Q7M732 Gm10698-201ENSMUST00000182663 604 ntBASIC33.2■■■□□ 2.91
Rtl1Q7M732 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC33.2■■■□□ 2.9
Rtl1Q7M732 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Rtl1Q7M732 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rtl1Q7M732 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Rtl1Q7M732 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC33.17■■■□□ 2.9
Rtl1Q7M732 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Rtl1Q7M732 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Rtl1Q7M732 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC33.17■■■□□ 2.9
Rtl1Q7M732 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
Rtl1Q7M732 Gm9194-201ENSMUST00000220749 1447 ntBASIC33.17■■■□□ 2.9
Rtl1Q7M732 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
Rtl1Q7M732 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC33.16■■■□□ 2.9
Rtl1Q7M732 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rtl1Q7M732 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rtl1Q7M732 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
Rtl1Q7M732 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC33.14■■■□□ 2.9
Rtl1Q7M732 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rtl1Q7M732 Gm13181-201ENSMUST00000120117 1069 ntBASIC33.13■■■□□ 2.89
Rtl1Q7M732 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rtl1Q7M732 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl1Q7M732 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rtl1Q7M732 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms