Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 MIPEPP3-201ENST00000412105 444 ntBASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 AC093787.1-201ENST00000450396 207 ntBASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 TSPY20P-201ENST00000450910 630 ntBASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 AC016405.3-201ENST00000607710 860 ntBASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC62Q6P9F0 MKRN4P-201ENST00000444706 1521 ntBASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 MIR4758-201ENST00000577688 71 ntBASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 AC243732.1-201ENST00000612648 864 ntBASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 TMEM191A-211ENST00000637163 1067 ntBASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CCDC62Q6P9F0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CCDC62Q6P9F0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 C9orf163-202ENST00000624034 2573 ntBASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 AC026471.6-201ENST00000622954 1905 ntBASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 AL162412.1-201ENST00000567129 965 ntBASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 MIR4651-201ENST00000582622 73 ntBASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 AC069236.1-201ENST00000604339 616 ntBASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC62Q6P9F0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 AC133561.1-201ENST00000568600 2415 ntBASIC23.72■■□□□ 1.39
CCDC62Q6P9F0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 AL591742.1-201ENST00000604433 565 ntBASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 AC008694.1-202ENST00000636953 945 ntBASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
CCDC62Q6P9F0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCDC62Q6P9F0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 AC092118.2-201ENST00000613495 667 ntBASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CCDC62Q6P9F0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms