Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VcanQ62059 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 AW822252-206ENSMUST00000208904 237 ntBASIC17.55■□□□□ 0.4
VcanQ62059 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VcanQ62059 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.55■□□□□ 0.4
VcanQ62059 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.54■□□□□ 0.4
VcanQ62059 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Gm6443-201ENSMUST00000203599 874 ntBASIC17.54■□□□□ 0.4
VcanQ62059 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VcanQ62059 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VcanQ62059 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.54■□□□□ 0.4
VcanQ62059 Gm45058-201ENSMUST00000205810 766 ntBASIC17.54■□□□□ 0.4
VcanQ62059 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VcanQ62059 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VcanQ62059 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VcanQ62059 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
VcanQ62059 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VcanQ62059 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.53■□□□□ 0.4
VcanQ62059 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.53■□□□□ 0.4
VcanQ62059 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VcanQ62059 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VcanQ62059 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VcanQ62059 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VcanQ62059 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VcanQ62059 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VcanQ62059 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VcanQ62059 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VcanQ62059 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VcanQ62059 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
VcanQ62059 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VcanQ62059 Timm23-208ENSMUST00000226683 750 ntBASIC17.52■□□□□ 0.39
VcanQ62059 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
VcanQ62059 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
VcanQ62059 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
VcanQ62059 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VcanQ62059 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VcanQ62059 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VcanQ62059 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.51■□□□□ 0.39
VcanQ62059 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VcanQ62059 Gm43183-201ENSMUST00000200632 547 ntBASIC17.51■□□□□ 0.39
VcanQ62059 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VcanQ62059 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.51■□□□□ 0.39
VcanQ62059 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VcanQ62059 AA386476-201ENSMUST00000098781 1665 ntBASIC17.51■□□□□ 0.39
VcanQ62059 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VcanQ62059 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
VcanQ62059 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VcanQ62059 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VcanQ62059 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.5■□□□□ 0.39
VcanQ62059 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.5■□□□□ 0.39
VcanQ62059 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.5■□□□□ 0.39
VcanQ62059 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.5■□□□□ 0.39
VcanQ62059 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.5■□□□□ 0.39
VcanQ62059 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.5■□□□□ 0.39
VcanQ62059 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.5■□□□□ 0.39
VcanQ62059 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.5■□□□□ 0.39
VcanQ62059 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VcanQ62059 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.49■□□□□ 0.39
VcanQ62059 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VcanQ62059 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VcanQ62059 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.49■□□□□ 0.39
VcanQ62059 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VcanQ62059 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.49■□□□□ 0.39
VcanQ62059 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms