Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brf2Q3UAW9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Brf2Q3UAW9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brf2Q3UAW9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brf2Q3UAW9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brf2Q3UAW9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
Brf2Q3UAW9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Brf2Q3UAW9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Brf2Q3UAW9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf2Q3UAW9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.45■□□□□ 0.38
Brf2Q3UAW9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf2Q3UAW9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Brf2Q3UAW9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms