Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.62■□□□□ 0.73
Trim43aQ3TL54 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43aQ3TL54 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43aQ3TL54 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43aQ3TL54 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43aQ3TL54 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.58■□□□□ 0.73
Trim43aQ3TL54 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.58■□□□□ 0.73
Trim43aQ3TL54 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Mir7075-201ENSMUST00000184187 82 ntBASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Gm6139-201ENSMUST00000079261 882 ntBASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim43aQ3TL54 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim43aQ3TL54 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.57■□□□□ 0.72
Trim43aQ3TL54 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.56■□□□□ 0.72
Trim43aQ3TL54 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Trim43aQ3TL54 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms