Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 STE2YFL026W 1296 nt3.96□□□□□ -1.78
BRE1Q07457 YHR097CYHR097C 1101 nt3.96□□□□□ -1.78
BRE1Q07457 YJR037WYJR037W 384 nt3.96□□□□□ -1.78
BRE1Q07457 COQ9YLR201C 783 nt3.96□□□□□ -1.78
BRE1Q07457 YMR122W-AYMR122W-A 255 nt3.96□□□□□ -1.78
BRE1Q07457 YMR141CYMR141C 309 nt3.96□□□□□ -1.78
BRE1Q07457 YNL050CYNL050C 813 nt3.96□□□□□ -1.78
BRE1Q07457 TPT1YOL102C 693 nt3.96□□□□□ -1.78
BRE1Q07457 YOR203WYOR203W 354 nt3.96□□□□□ -1.78
BRE1Q07457 SRL4YPL033C 846 nt3.96□□□□□ -1.78
BRE1Q07457 POL30YBR088C 777 nt3.96□□□□□ -1.78
BRE1Q07457 YJR030CYJR030C 2238 nt3.95□□□□□ -1.78
BRE1Q07457 PSP1YDR505C 2526 nt3.95□□□□□ -1.78
BRE1Q07457 SPA2YLL021W 4401 nt3.95□□□□□ -1.78
BRE1Q07457 EXO5YBR163W 1758 nt3.95□□□□□ -1.78
BRE1Q07457 VFA1YER128W 612 nt3.95□□□□□ -1.78
BRE1Q07457 YFR010W-AYFR010W-A 189 nt3.95□□□□□ -1.78
BRE1Q07457 YGR226CYGR226C 210 nt3.95□□□□□ -1.78
BRE1Q07457 YNL184CYNL184C 327 nt3.95□□□□□ -1.78
BRE1Q07457 UBP8YMR223W 1416 nt3.95□□□□□ -1.78
BRE1Q07457 SNT1YCR033W 3681 nt3.94□□□□□ -1.78
BRE1Q07457 ERT1YBR239C 1590 nt3.94□□□□□ -1.78
BRE1Q07457 GLC3YEL011W 2115 nt3.94□□□□□ -1.78
BRE1Q07457 YEL075CYEL075C 369 nt3.94□□□□□ -1.78
BRE1Q07457 TUM1YOR251C 915 nt3.94□□□□□ -1.78
BRE1Q07457 RRG7YOR305W 729 nt3.94□□□□□ -1.78
BRE1Q07457 KAR4YCL055W 1008 nt3.94□□□□□ -1.78
BRE1Q07457 YNR063WYNR063W 1824 nt3.93□□□□□ -1.78
BRE1Q07457 SMC2YFR031C 3513 nt3.93□□□□□ -1.78
BRE1Q07457 SRP1YNL189W 1629 nt3.93□□□□□ -1.78
BRE1Q07457 HFM1YGL251C 3564 nt3.93□□□□□ -1.78
BRE1Q07457 ERP3YDL018C 678 nt3.93□□□□□ -1.78
BRE1Q07457 YDR526CYDR526C 471 nt3.93□□□□□ -1.78
BRE1Q07457 YKL065W-AYKL065W-A 222 nt3.93□□□□□ -1.78
BRE1Q07457 EMP70YLR083C 2004 nt3.93□□□□□ -1.78
BRE1Q07457 UBP5YER144C 2418 nt3.93□□□□□ -1.78
BRE1Q07457 ESC2YDR363W 1371 nt3.92□□□□□ -1.78
BRE1Q07457 CDC37YDR168W 1521 nt3.92□□□□□ -1.78
BRE1Q07457 YPD1YDL235C 504 nt3.92□□□□□ -1.78
BRE1Q07457 YDR203WYDR203W 318 nt3.92□□□□□ -1.78
BRE1Q07457 HTA1YDR225W 399 nt3.92□□□□□ -1.78
BRE1Q07457 SEC4YFL005W 648 nt3.92□□□□□ -1.78
BRE1Q07457 YGL109WYGL109W 324 nt3.92□□□□□ -1.78
BRE1Q07457 YGR039WYGR039W 312 nt3.92□□□□□ -1.78
BRE1Q07457 AIM19YIL087C 474 nt3.92□□□□□ -1.78
BRE1Q07457 YKL123WYKL123W 381 nt3.92□□□□□ -1.78
BRE1Q07457 OST6YML019W 999 nt3.92□□□□□ -1.78
BRE1Q07457 HHF2YNL030W 312 nt3.92□□□□□ -1.78
BRE1Q07457 YNR025CYNR025C 360 nt3.92□□□□□ -1.78
BRE1Q07457 YBR090CYBR090C 369 nt3.92□□□□□ -1.78
BRE1Q07457 YTA7YGR270W 4140 nt3.92□□□□□ -1.78
BRE1Q07457 IOC3YFR013W 2364 nt3.92□□□□□ -1.78
BRE1Q07457 ARG5,6YER069W 2592 nt3.91□□□□□ -1.78
BRE1Q07457 snR68snR68 136 nt3.91□□□□□ -1.78
BRE1Q07457 PGD1YGL025C 1194 nt3.91□□□□□ -1.78
BRE1Q07457 YKR011CYKR011C 1062 nt3.91□□□□□ -1.78
BRE1Q07457 NNT1YLR285W 786 nt3.91□□□□□ -1.78
BRE1Q07457 VPS3YDR495C 3036 nt3.91□□□□□ -1.78
BRE1Q07457 RTT109YLL002W 1311 nt3.91□□□□□ -1.78
BRE1Q07457 ESA1YOR244W 1338 nt3.91□□□□□ -1.78
BRE1Q07457 SMC3YJL074C 3693 nt3.9□□□□□ -1.78
BRE1Q07457 XRN1YGL173C 4587 nt3.9□□□□□ -1.78
BRE1Q07457 OPI6YDL096C 327 nt3.9□□□□□ -1.79
BRE1Q07457 ARF1YDL192W 546 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)DtK(UUU)D 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)G1tK(UUU)G1 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)G2tK(UUU)G2 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)KtK(UUU)K 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)LtK(UUU)L 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)OtK(UUU)O 73 nt3.9□□□□□ -1.79
BRE1Q07457 tK(UUU)PtK(UUU)P 73 nt3.9□□□□□ -1.79
BRE1Q07457 AIM25YJR100C 984 nt3.9□□□□□ -1.79
BRE1Q07457 YKL115CYKL115C 393 nt3.9□□□□□ -1.79
BRE1Q07457 YLR154C-HYLR154C-H 132 nt3.9□□□□□ -1.79
BRE1Q07457 YLR156C-AYLR156C-A 132 nt3.9□□□□□ -1.79
BRE1Q07457 YLR157C-CYLR157C-C 132 nt3.9□□□□□ -1.79
BRE1Q07457 YLR159C-AYLR159C-A 132 nt3.9□□□□□ -1.79
BRE1Q07457 RPS28BYLR264W 204 nt3.9□□□□□ -1.79
BRE1Q07457 YOR152CYOR152C 771 nt3.9□□□□□ -1.79
BRE1Q07457 POP7YBR167C 423 nt3.9□□□□□ -1.79
BRE1Q07457 STU2YLR045C 2667 nt3.89□□□□□ -1.79
BRE1Q07457 RPA135YPR010C 3612 nt3.89□□□□□ -1.79
BRE1Q07457 YDR248CYDR248C 582 nt3.89□□□□□ -1.79
BRE1Q07457 AIM11YER093C-A 414 nt3.89□□□□□ -1.79
BRE1Q07457 MRM2YGL136C 963 nt3.89□□□□□ -1.79
BRE1Q07457 ATG10YLL042C 504 nt3.89□□□□□ -1.79
BRE1Q07457 CSI1YMR025W 888 nt3.89□□□□□ -1.79
BRE1Q07457 GOT1YMR292W 417 nt3.89□□□□□ -1.79
BRE1Q07457 YNR062CYNR062C 984 nt3.89□□□□□ -1.79
BRE1Q07457 HUT1YPL244C 1020 nt3.89□□□□□ -1.79
BRE1Q07457 RAD18YCR066W 1464 nt3.89□□□□□ -1.79
BRE1Q07457 YJL049WYJL049W 1353 nt3.89□□□□□ -1.79
BRE1Q07457 VPS9YML097C 1356 nt3.89□□□□□ -1.79
BRE1Q07457 RNT1YMR239C 1416 nt3.88□□□□□ -1.79
BRE1Q07457 YBP2YGL060W 1926 nt3.88□□□□□ -1.79
BRE1Q07457 FAP7YDL166C 594 nt3.88□□□□□ -1.79
BRE1Q07457 RMD6YEL072W 696 nt3.88□□□□□ -1.79
BRE1Q07457 YGR160WYGR160W 612 nt3.88□□□□□ -1.79
BRE1Q07457 AGE2YIL044C 897 nt3.88□□□□□ -1.79
BRE1Q07457 YIR040CYIR040C 333 nt3.88□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms