Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.11■□□□□ 0.33
Cacna1aP97445 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.1■□□□□ 0.33
Cacna1aP97445 Gm21814-202ENSMUST00000203277 873 ntBASIC17.1■□□□□ 0.33
Cacna1aP97445 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 Gm5417-201ENSMUST00000079706 384 ntBASIC17.1■□□□□ 0.33
Cacna1aP97445 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cacna1aP97445 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cacna1aP97445 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1aP97445 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.09■□□□□ 0.33
Cacna1aP97445 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1aP97445 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1aP97445 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1aP97445 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1aP97445 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1aP97445 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1aP97445 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1aP97445 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1aP97445 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1aP97445 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1aP97445 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Cacna1aP97445 Ank2-226ENSMUST00000189368 339 ntBASIC17.08■□□□□ 0.32
Cacna1aP97445 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1aP97445 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1aP97445 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cacna1aP97445 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1aP97445 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.07■□□□□ 0.32
Cacna1aP97445 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.07■□□□□ 0.32
Cacna1aP97445 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.07■□□□□ 0.32
Cacna1aP97445 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cacna1aP97445 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1aP97445 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.06■□□□□ 0.32
Cacna1aP97445 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cacna1aP97445 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cacna1aP97445 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1aP97445 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cacna1aP97445 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1aP97445 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1aP97445 Gm44771-201ENSMUST00000206975 626 ntBASIC17.04■□□□□ 0.32
Cacna1aP97445 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Cacna1aP97445 Gm18025-201ENSMUST00000221733 862 ntBASIC17.04■□□□□ 0.32
Cacna1aP97445 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1aP97445 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1aP97445 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms