Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd27P41272 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cd27P41272 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd27P41272 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd27P41272 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Cd27P41272 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cd27P41272 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.87□□□□□ -0.03
Cd27P41272 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.87□□□□□ -0.03
Cd27P41272 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd27P41272 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd27P41272 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cd27P41272 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.86□□□□□ -0.03
Cd27P41272 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.86□□□□□ -0.03
Cd27P41272 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.86□□□□□ -0.03
Cd27P41272 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.86□□□□□ -0.03
Cd27P41272 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd27P41272 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.85□□□□□ -0.03
Cd27P41272 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cd27P41272 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Cd27P41272 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd27P41272 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd27P41272 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd27P41272 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd27P41272 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd27P41272 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cd27P41272 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cd27P41272 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.84□□□□□ -0.03
Cd27P41272 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.84□□□□□ -0.03
Cd27P41272 Gm6211-202ENSMUST00000167849 925 ntBASIC14.84□□□□□ -0.03
Cd27P41272 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Cd27P41272 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd27P41272 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd27P41272 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cd27P41272 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cd27P41272 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.83□□□□□ -0.04
Cd27P41272 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.83□□□□□ -0.04
Cd27P41272 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cd27P41272 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd27P41272 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cd27P41272 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cd27P41272 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cd27P41272 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cd27P41272 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.82□□□□□ -0.04
Cd27P41272 Gm12933-201ENSMUST00000120203 872 ntBASIC14.82□□□□□ -0.04
Cd27P41272 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.82□□□□□ -0.04
Cd27P41272 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.82□□□□□ -0.04
Cd27P41272 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.82□□□□□ -0.04
Cd27P41272 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd27P41272 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms