Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.6■■□□□ 1.691e-5■■■■□ 25.7
DKC1O60832 PTK2-251ENST00000523797 405 ntTSL 325.07■■□□□ 1.61e-5■■■■□ 25.7
DKC1O60832 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51e-5■■■■□ 25.7
DKC1O60832 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.54e-15■■■■□ 25.7
DKC1O60832 LINC01881-207ENST00000622435 555 ntTSL 523.98■■□□□ 1.431e-5■■■■□ 25.7
DKC1O60832 PTK2-257ENST00000524357 535 ntTSL 423.33■■□□□ 1.331e-5■■■■□ 25.7
DKC1O60832 WNK2-206ENST00000448039 2385 ntAPPRIS ALT2 TSL 1 (best)23.3■■□□□ 1.325e-6■■■■□ 25.7
DKC1O60832 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.282e-10■■■■□ 25.7
DKC1O60832 KRI1-214ENST00000612875 2608 ntTSL 222.66■■□□□ 1.221e-5■■■■□ 25.7
DKC1O60832 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.54■■□□□ 1.21e-5■■■■□ 25.7
DKC1O60832 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.45■■□□□ 1.181e-5■■■■□ 25.7
DKC1O60832 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.161e-5■■■■□ 25.7
DKC1O60832 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.151e-5■■■■□ 25.7
DKC1O60832 KRI1-202ENST00000432197 885 ntTSL 521.77■■□□□ 1.081e-5■■■■□ 25.7
DKC1O60832 LPP-204ENST00000420410 535 ntTSL 321.45■■□□□ 1.021e-5■■■■□ 25.7
DKC1O60832 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.972e-10■■■■□ 25.7
DKC1O60832 PTDSS2-212ENST00000531520 890 ntTSL 321.04■□□□□ 0.961e-5■■■■□ 25.7
DKC1O60832 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.04■□□□□ 0.965e-6■■■■□ 25.7
DKC1O60832 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.93■□□□□ 0.941e-5■■■■□ 25.7
DKC1O60832 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.931e-5■■■■□ 25.7
DKC1O60832 KRI1-203ENST00000478863 2545 ntTSL 220.74■□□□□ 0.911e-5■■■■□ 25.7
DKC1O60832 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.52■□□□□ 0.881e-5■■■■□ 25.7
DKC1O60832 PTK2-219ENST00000520045 602 ntTSL 420.52■□□□□ 0.881e-5■■■■□ 25.7
DKC1O60832 PTK2-254ENST00000524040 475 ntTSL 220.51■□□□□ 0.871e-5■■■■□ 25.7
DKC1O60832 PTK2-231ENST00000521332 630 ntTSL 420.51■□□□□ 0.871e-5■■■■□ 25.7
DKC1O60832 USB1-213ENST00000566292 575 ntTSL 220.51■□□□□ 0.871e-5■■■■□ 25.7
DKC1O60832 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.865e-6■■■■□ 25.7
DKC1O60832 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.831e-5■■■■□ 25.7
DKC1O60832 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.04■□□□□ 0.81e-5■■■■□ 25.7
DKC1O60832 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.771e-5■■■■□ 25.7
DKC1O60832 LINC01881-202ENST00000431796 565 ntTSL 419.83■□□□□ 0.771e-5■■■■□ 25.7
DKC1O60832 KRI1-210ENST00000543682 571 ntTSL 319.79■□□□□ 0.761e-5■■■■□ 25.7
DKC1O60832 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.721e-5■■■■□ 25.7
DKC1O60832 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.721e-5■■■■□ 25.7
DKC1O60832 KRI1-208ENST00000537964 565 ntTSL 419.56■□□□□ 0.721e-5■■■■□ 25.7
DKC1O60832 USB1-209ENST00000564387 558 ntTSL 419.43■□□□□ 0.71e-5■■■■□ 25.7
DKC1O60832 KRI1-213ENST00000546063 740 ntTSL 419.32■□□□□ 0.681e-5■■■■□ 25.7
DKC1O60832 PTK2-218ENST00000519993 4388 ntTSL 1 (best)19.16■□□□□ 0.661e-5■■■■□ 25.7
DKC1O60832 MTSS1-206ENST00000519168 1822 ntTSL 218.97■□□□□ 0.631e-5■■■■□ 25.7
DKC1O60832 USB1-211ENST00000565662 719 ntTSL 418.92■□□□□ 0.621e-5■■■■□ 25.7
DKC1O60832 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.611e-5■■■■□ 25.7
DKC1O60832 ASS1-208ENST00000470849 652 ntTSL 218.87■□□□□ 0.611e-5■■■■□ 25.7
DKC1O60832 USB1-204ENST00000561568 671 ntTSL 418.41■□□□□ 0.541e-5■■■■□ 25.7
DKC1O60832 USB1-206ENST00000562534 562 ntTSL 418.41■□□□□ 0.541e-5■■■■□ 25.7
DKC1O60832 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.535e-6■■■■□ 25.7
DKC1O60832 ZNF251-202ENST00000524394 315 ntTSL 518.31■□□□□ 0.521e-5■■■■□ 25.7
DKC1O60832 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.511e-5■■■■□ 25.7
DKC1O60832 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.22■□□□□ 0.511e-5■■■■□ 25.7
DKC1O60832 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.491e-5■■■■□ 25.7
DKC1O60832 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.481e-5■■■■□ 25.7
DKC1O60832 USB1-215ENST00000569252 573 ntTSL 418.01■□□□□ 0.471e-5■■■■□ 25.7
DKC1O60832 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.95■□□□□ 0.461e-5■■■■□ 25.7
DKC1O60832 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.461e-5■■■■□ 25.7
DKC1O60832 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)17.5■□□□□ 0.395e-6■■■■□ 25.7
DKC1O60832 USB1-208ENST00000563207 464 ntTSL 517.48■□□□□ 0.391e-5■■■■□ 25.7
DKC1O60832 ASS1-207ENST00000467695 580 ntTSL 217.25■□□□□ 0.351e-5■■■■□ 25.7
DKC1O60832 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.321e-5■■■■□ 25.7
DKC1O60832 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.99■□□□□ 0.311e-5■■■■□ 25.7
DKC1O60832 COL4A5-203ENST00000470339 782 ntTSL 316.91■□□□□ 0.31e-5■■■■□ 25.7
DKC1O60832 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.291e-5■■■■□ 25.7
DKC1O60832 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.281e-5■■■■□ 25.7
DKC1O60832 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.61■□□□□ 0.251e-5■■■■□ 25.7
DKC1O60832 USB1-214ENST00000568848 548 ntTSL 416.46■□□□□ 0.231e-5■■■■□ 25.7
DKC1O60832 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.21e-5■■■■□ 25.7
DKC1O60832 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.28■□□□□ 0.26e-7■■■■□ 25.7
DKC1O60832 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.23■□□□□ 0.191e-5■■■■□ 25.7
DKC1O60832 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.192e-10■■■■□ 25.7
DKC1O60832 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.166e-7■■■■□ 25.7
DKC1O60832 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.98■□□□□ 0.151e-5■■■■□ 25.7
DKC1O60832 LPP-207ENST00000443217 400 ntTSL 315.87■□□□□ 0.131e-5■■■■□ 25.7
DKC1O60832 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.111e-5■■■■□ 25.7
DKC1O60832 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.55■□□□□ 0.081e-5■■■■□ 25.7
DKC1O60832 ZBTB44-203ENST00000445008 3848 ntTSL 1 (best)15.49■□□□□ 0.071e-5■■■■□ 25.7
DKC1O60832 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.061e-5■■■■□ 25.7
DKC1O60832 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.041e-5■■■■□ 25.7
DKC1O60832 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.31■□□□□ 0.041e-5■■■■□ 25.7
DKC1O60832 ASS1-210ENST00000493984 687 ntTSL 515.31■□□□□ 0.041e-5■■■■□ 25.7
DKC1O60832 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.28■□□□□ 0.041e-5■■■■□ 25.7
DKC1O60832 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.041e-5■■■■□ 25.7
DKC1O60832 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.034e-15■■■■□ 25.7
DKC1O60832 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.13■□□□□ 0.011e-5■■■■□ 25.7
DKC1O60832 DPH5-213ENST00000490732 930 ntTSL 215.1■□□□□ 0.011e-5■■■■□ 25.7
DKC1O60832 KRI1-212ENST00000544397 514 ntTSL 415.04■□□□□ -01e-5■■■■□ 25.7
DKC1O60832 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.011e-5■■■■□ 25.7
DKC1O60832 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.011e-5■■■■□ 25.7
DKC1O60832 RNF213-216ENST00000573548 616 ntTSL 214.96□□□□□ -0.011e-5■■■■□ 25.7
DKC1O60832 PTDSS2-213ENST00000532614 437 ntTSL 314.88□□□□□ -0.031e-5■■■■□ 25.7
DKC1O60832 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.75□□□□□ -0.051e-5■■■■□ 25.7
DKC1O60832 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.75□□□□□ -0.051e-5■■■■□ 25.7
DKC1O60832 KDM4C-206ENST00000438023 4022 ntTSL 514.7□□□□□ -0.061e-5■■■■□ 25.7
DKC1O60832 DPH5-212ENST00000488789 1784 ntTSL 214.62□□□□□ -0.071e-5■■■■□ 25.7
DKC1O60832 MTSS1-214ENST00000523179 857 ntTSL 514.57□□□□□ -0.081e-5■■■■□ 25.7
DKC1O60832 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC14.3□□□□□ -0.121e-5■■■■□ 25.7
DKC1O60832 FAM3B-205ENST00000479810 2742 ntTSL 214.29□□□□□ -0.121e-5■■■■□ 25.7
DKC1O60832 SALL1-205ENST00000570206 3896 ntTSL 514.29□□□□□ -0.121e-5■■■■□ 25.7
DKC1O60832 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.121e-5■■■■□ 25.7
DKC1O60832 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.131e-5■■■■□ 25.7
DKC1O60832 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.11□□□□□ -0.151e-5■■■■□ 25.7
DKC1O60832 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.99□□□□□ -0.171e-5■■■■□ 25.7
DKC1O60832 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.181e-5■■■■□ 25.7
Retrieved 100 of 8,567 protein–RNA pairs in 211.7 ms