Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.77■■□□□ 1.08
Usp42B2RQC2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp42B2RQC2 Gm12933-201ENSMUST00000120203 872 ntBASIC21.77■■□□□ 1.07
Usp42B2RQC2 Gm6211-202ENSMUST00000167849 925 ntBASIC21.77■■□□□ 1.07
Usp42B2RQC2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.76■■□□□ 1.07
Usp42B2RQC2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Usp42B2RQC2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp42B2RQC2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.74■■□□□ 1.07
Usp42B2RQC2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.74■■□□□ 1.07
Usp42B2RQC2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Usp42B2RQC2 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.74■■□□□ 1.07
Usp42B2RQC2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Usp42B2RQC2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp42B2RQC2 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.73■■□□□ 1.07
Usp42B2RQC2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp42B2RQC2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp42B2RQC2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Mir5133-201ENSMUST00000174955 77 ntBASIC21.72■■□□□ 1.07
Usp42B2RQC2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp42B2RQC2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.71■■□□□ 1.07
Usp42B2RQC2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp42B2RQC2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp42B2RQC2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Usp42B2RQC2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Usp42B2RQC2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Usp42B2RQC2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.68■■□□□ 1.06
Usp42B2RQC2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp42B2RQC2 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.68■■□□□ 1.06
Usp42B2RQC2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Usp42B2RQC2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms