Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
H2afb1S4R1E0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
H2afb1S4R1E0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.83■□□□□ 0.29
H2afb1S4R1E0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
H2afb1S4R1E0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.83■□□□□ 0.29
H2afb1S4R1E0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Gm21956-201ENSMUST00000179946 522 ntBASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb1S4R1E0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Gm12821-201ENSMUST00000120022 600 ntBASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Smad6-203ENSMUST00000179458 273 ntBASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1S4R1E0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1S4R1E0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Gm8493-201ENSMUST00000196881 489 ntBASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.8■□□□□ 0.28
H2afb1S4R1E0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms