Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM43Q96BQ3 KRT16P2-201ENST00000414673 1423 ntBASIC23.25■■□□□ 1.31
TRIM43Q96BQ3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 SNORA78-201ENST00000459373 127 ntBASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM43Q96BQ3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM43Q96BQ3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 AC060766.5-201ENST00000590539 871 ntBASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 CYP2T3P-201ENST00000601990 817 ntBASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM43Q96BQ3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 HLA-B-256ENST00000639848 1089 ntBASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM43Q96BQ3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRIM43Q96BQ3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 RN7SL471P-201ENST00000580476 299 ntBASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM43Q96BQ3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 AC233263.1-201ENST00000578059 224 ntBASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM43Q96BQ3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 AC020928.2-201ENST00000588717 2197 ntBASIC23.17■■□□□ 1.3
TRIM43Q96BQ3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRIM43Q96BQ3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms