Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 AC092437.1-201ENST00000624794 1048 ntBASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC01555Q8NAE3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LINC01555Q8NAE3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 AC092666.2-201ENST00000613287 246 ntBASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LINC01555Q8NAE3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 AC006015.1-201ENST00000429970 570 ntBASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 AC137761.2-201ENST00000561729 223 ntBASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 AC145350.3-201ENST00000569033 163 ntBASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC01555Q8NAE3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LINC01555Q8NAE3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC01555Q8NAE3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.39■□□□□ 0.86
LINC01555Q8NAE3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LINC01555Q8NAE3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 AC244015.2-201ENST00000616358 1861 ntBASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINC01555Q8NAE3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 AC061975.6-201ENST00000579045 1553 ntBASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC01555Q8NAE3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms