Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.84■■□□□ 1.09
Alx1Q8C8B0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alx1Q8C8B0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Rab3c-203ENSMUST00000224180 967 ntBASIC21.83■■□□□ 1.09
Alx1Q8C8B0 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.83■■□□□ 1.09
Alx1Q8C8B0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Alx1Q8C8B0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alx1Q8C8B0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Golph3-205ENSMUST00000228671 2842 ntBASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alx1Q8C8B0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alx1Q8C8B0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Alx1Q8C8B0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alx1Q8C8B0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.79■■□□□ 1.08
Alx1Q8C8B0 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.79■■□□□ 1.08
Alx1Q8C8B0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alx1Q8C8B0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Alx1Q8C8B0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.78■■□□□ 1.08
Alx1Q8C8B0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.77■■□□□ 1.08
Alx1Q8C8B0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alx1Q8C8B0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Alx1Q8C8B0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Alx1Q8C8B0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.76■■□□□ 1.07
Alx1Q8C8B0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms