Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp6nlQ80XC3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Usp6nlQ80XC3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp6nlQ80XC3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp6nlQ80XC3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp6nlQ80XC3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp6nlQ80XC3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp6nlQ80XC3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.58■□□□□ 0.88
Usp6nlQ80XC3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Usp6nlQ80XC3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Usp6nlQ80XC3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Usp6nlQ80XC3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Gm11927-201ENSMUST00000118472 759 ntBASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp6nlQ80XC3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp6nlQ80XC3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp6nlQ80XC3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Flg-201ENSMUST00000050758 1488 ntBASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp6nlQ80XC3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp6nlQ80XC3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp6nlQ80XC3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
Usp6nlQ80XC3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Usp6nlQ80XC3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp6nlQ80XC3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp6nlQ80XC3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms