Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.63■□□□□ 0.41
VcanQ62059 Gm18032-201ENSMUST00000222541 538 ntBASIC17.63■□□□□ 0.41
VcanQ62059 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
VcanQ62059 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VcanQ62059 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Gm17661-201ENSMUST00000170317 270 ntBASIC17.62■□□□□ 0.41
VcanQ62059 Gm18959-201ENSMUST00000208954 655 ntBASIC17.62■□□□□ 0.41
VcanQ62059 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.62■□□□□ 0.41
VcanQ62059 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VcanQ62059 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.62■□□□□ 0.41
VcanQ62059 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VcanQ62059 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.61■□□□□ 0.41
VcanQ62059 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VcanQ62059 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.61■□□□□ 0.41
VcanQ62059 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VcanQ62059 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VcanQ62059 Gm7153-201ENSMUST00000117092 455 ntBASIC17.6■□□□□ 0.41
VcanQ62059 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.6■□□□□ 0.41
VcanQ62059 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VcanQ62059 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VcanQ62059 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.6■□□□□ 0.41
VcanQ62059 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VcanQ62059 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.59■□□□□ 0.41
VcanQ62059 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VcanQ62059 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.59■□□□□ 0.41
VcanQ62059 Gm7860-201ENSMUST00000121190 879 ntBASIC17.59■□□□□ 0.41
VcanQ62059 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VcanQ62059 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VcanQ62059 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VcanQ62059 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.58■□□□□ 0.41
VcanQ62059 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VcanQ62059 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VcanQ62059 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VcanQ62059 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VcanQ62059 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
VcanQ62059 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.58■□□□□ 0.4
VcanQ62059 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VcanQ62059 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.57■□□□□ 0.4
VcanQ62059 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VcanQ62059 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VcanQ62059 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VcanQ62059 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.56■□□□□ 0.4
VcanQ62059 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VcanQ62059 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VcanQ62059 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VcanQ62059 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VcanQ62059 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VcanQ62059 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VcanQ62059 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.55■□□□□ 0.4
VcanQ62059 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms