Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Thumpd3P97770 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Thumpd3P97770 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.89■□□□□ 0.61
Thumpd3P97770 Smad6-203ENSMUST00000179458 273 ntBASIC18.89■□□□□ 0.61
Thumpd3P97770 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Thumpd3P97770 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Thumpd3P97770 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd3P97770 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.88■□□□□ 0.61
Thumpd3P97770 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.88■□□□□ 0.61
Thumpd3P97770 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Thumpd3P97770 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd3P97770 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.87■□□□□ 0.61
Thumpd3P97770 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Thumpd3P97770 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd3P97770 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd3P97770 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.87■□□□□ 0.61
Thumpd3P97770 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd3P97770 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.87■□□□□ 0.61
Thumpd3P97770 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd3P97770 Rarb-207ENSMUST00000225921 2756 ntBASIC18.87■□□□□ 0.61
Thumpd3P97770 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.87■□□□□ 0.61
Thumpd3P97770 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.86■□□□□ 0.61
Thumpd3P97770 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.86■□□□□ 0.61
Thumpd3P97770 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Gm10493-201ENSMUST00000097270 612 ntBASIC18.86■□□□□ 0.61
Thumpd3P97770 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Thumpd3P97770 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Thumpd3P97770 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd3P97770 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Thumpd3P97770 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Thumpd3P97770 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.85■□□□□ 0.61
Thumpd3P97770 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.85■□□□□ 0.61
Thumpd3P97770 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.85■□□□□ 0.61
Thumpd3P97770 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd3P97770 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd3P97770 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.84■□□□□ 0.61
Thumpd3P97770 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd3P97770 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.84■□□□□ 0.61
Thumpd3P97770 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.84■□□□□ 0.61
Thumpd3P97770 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.84■□□□□ 0.61
Thumpd3P97770 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd3P97770 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd3P97770 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd3P97770 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.84■□□□□ 0.61
Thumpd3P97770 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd3P97770 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd3P97770 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd3P97770 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd3P97770 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Thumpd3P97770 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Thumpd3P97770 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.83■□□□□ 0.6
Thumpd3P97770 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Thumpd3P97770 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Thumpd3P97770 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd3P97770 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms