Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ATG13YPR185W 2217 nt4.07□□□□□ -1.76
SSM4P40318 PMI40YER003C 1290 nt4.07□□□□□ -1.76
SSM4P40318 EPT1YHR123W 1176 nt4.07□□□□□ -1.76
SSM4P40318 YHR214C-EYHR214C-E 300 nt4.07□□□□□ -1.76
SSM4P40318 YIL161WYIL161W 708 nt4.07□□□□□ -1.76
SSM4P40318 YAR070CYAR070C 300 nt4.07□□□□□ -1.76
SSM4P40318 HUB1YNR032C-A 222 nt4.07□□□□□ -1.76
SSM4P40318 SFG1YOR315W 1041 nt4.07□□□□□ -1.76
SSM4P40318 YPL107WYPL107W 747 nt4.07□□□□□ -1.76
SSM4P40318 KIP3YGL216W 2418 nt4.07□□□□□ -1.76
SSM4P40318 ERG11YHR007C 1593 nt4.07□□□□□ -1.76
SSM4P40318 FRE8YLR047C 2061 nt4.06□□□□□ -1.76
SSM4P40318 VPS33YLR396C 2076 nt4.06□□□□□ -1.76
SSM4P40318 DSE1YER124C 1722 nt4.06□□□□□ -1.76
SSM4P40318 DET1YDR051C 1005 nt4.06□□□□□ -1.76
SSM4P40318 YEL010WYEL010W 351 nt4.06□□□□□ -1.76
SSM4P40318 YLR347W-AYLR347W-A 141 nt4.06□□□□□ -1.76
SSM4P40318 PRM4YPL156C 855 nt4.06□□□□□ -1.76
SSM4P40318 PBP2YBR233W 1242 nt4.06□□□□□ -1.76
SSM4P40318 YLR278CYLR278C 4026 nt4.06□□□□□ -1.76
SSM4P40318 MTL1YGR023W 1656 nt4.06□□□□□ -1.76
SSM4P40318 FUN30YAL019W 3396 nt4.05□□□□□ -1.76
SSM4P40318 RPS29BYDL061C 171 nt4.05□□□□□ -1.76
SSM4P40318 RGI1YER067W 486 nt4.05□□□□□ -1.76
SSM4P40318 YFR057WYFR057W 456 nt4.05□□□□□ -1.76
SSM4P40318 YIR014WYIR014W 729 nt4.05□□□□□ -1.76
SSM4P40318 YMR158C-AYMR158C-A 138 nt4.05□□□□□ -1.76
SSM4P40318 ECM13YBL043W 774 nt4.05□□□□□ -1.76
SSM4P40318 IPP1YBR011C 864 nt4.05□□□□□ -1.76
SSM4P40318 RPL20BYOR312C 519 nt4.05□□□□□ -1.76
SSM4P40318 STE24YJR117W 1362 nt4.05□□□□□ -1.76
SSM4P40318 SPT14YPL175W 1359 nt4.05□□□□□ -1.76
SSM4P40318 AYT1YLL063C 1425 nt4.05□□□□□ -1.76
SSM4P40318 RAX2YLR084C 3663 nt4.04□□□□□ -1.76
SSM4P40318 YJR030CYJR030C 2238 nt4.04□□□□□ -1.76
SSM4P40318 QRI7YDL104C 1224 nt4.04□□□□□ -1.76
SSM4P40318 VMA7YGR020C 357 nt4.04□□□□□ -1.76
SSM4P40318 YGR064WYGR064W 369 nt4.04□□□□□ -1.76
SSM4P40318 JIP3YLR331C 378 nt4.04□□□□□ -1.76
SSM4P40318 YOR331CYOR331C 558 nt4.04□□□□□ -1.76
SSM4P40318 YPL035CYPL035C 348 nt4.04□□□□□ -1.76
SSM4P40318 PHO88YBR106W 567 nt4.04□□□□□ -1.76
SSM4P40318 CTP1YBR291C 900 nt4.04□□□□□ -1.76
SSM4P40318 NRP1YDL167C 2160 nt4.03□□□□□ -1.76
SSM4P40318 YDL199CYDL199C 2064 nt4.03□□□□□ -1.76
SSM4P40318 HEF3YNL014W 3135 nt4.03□□□□□ -1.76
SSM4P40318 YDL162CYDL162C 357 nt4.03□□□□□ -1.76
SSM4P40318 ATP5YDR298C 639 nt4.03□□□□□ -1.76
SSM4P40318 RPN9YDR427W 1182 nt4.03□□□□□ -1.76
SSM4P40318 YGL230CYGL230C 444 nt4.03□□□□□ -1.76
SSM4P40318 DOG1YHR044C 741 nt4.03□□□□□ -1.76
SSM4P40318 SUI2YJR007W 915 nt4.03□□□□□ -1.76
SSM4P40318 DLT1YMR126C 1029 nt4.03□□□□□ -1.76
SSM4P40318 MCT1YOR221C 1083 nt4.03□□□□□ -1.76
SSM4P40318 MRPS9YBR146W 837 nt4.03□□□□□ -1.76
SSM4P40318 UBP14YBR058C 2346 nt4.03□□□□□ -1.76
SSM4P40318 CBS2YDR197W 1170 nt4.02□□□□□ -1.77
SSM4P40318 FMP10YER182W 735 nt4.02□□□□□ -1.77
SSM4P40318 YKL131WYKL131W 522 nt4.02□□□□□ -1.77
SSM4P40318 RPL6AYML073C 531 nt4.02□□□□□ -1.77
SSM4P40318 SRT1YMR101C 1032 nt4.02□□□□□ -1.77
SSM4P40318 GCN1YGL195W 8019 nt4.02□□□□□ -1.77
SSM4P40318 MSM1YGR171C 1728 nt4.02□□□□□ -1.77
SSM4P40318 BCH1YMR237W 2175 nt4.02□□□□□ -1.77
SSM4P40318 HUL5YGL141W 2733 nt4.02□□□□□ -1.77
SSM4P40318 SMI1YGR229C 1518 nt4.01□□□□□ -1.77
SSM4P40318 RSM27YGR215W 333 nt4.01□□□□□ -1.77
SSM4P40318 SNX4YJL036W 1272 nt4.01□□□□□ -1.77
SSM4P40318 SPH1YLR313C 1593 nt4.01□□□□□ -1.77
SSM4P40318 TAF6YGL112C 1551 nt4□□□□□ -1.77
SSM4P40318 CCE1YKL011C 1062 nt4□□□□□ -1.77
SSM4P40318 SWD2YKL018W 990 nt4□□□□□ -1.77
SSM4P40318 TDA8YAL064C-A 381 nt4□□□□□ -1.77
SSM4P40318 SEC14YMR079W 915 nt4□□□□□ -1.77
SSM4P40318 YNL013CYNL013C 378 nt4□□□□□ -1.77
SSM4P40318 RAS1YOR101W 930 nt4□□□□□ -1.77
SSM4P40318 YPR027CYPR027C 834 nt4□□□□□ -1.77
SSM4P40318 AEP2YMR282C 1743 nt4□□□□□ -1.77
SSM4P40318 TSC11YER093C 4293 nt3.99□□□□□ -1.77
SSM4P40318 RUB1YDR139C 234 nt3.99□□□□□ -1.77
SSM4P40318 PRE1YER012W 597 nt3.99□□□□□ -1.77
SSM4P40318 PTI1YGR156W 1278 nt3.99□□□□□ -1.77
SSM4P40318 YJR020WYJR020W 333 nt3.99□□□□□ -1.77
SSM4P40318 RPN13YLR421C 471 nt3.99□□□□□ -1.77
SSM4P40318 PEX15YOL044W 1152 nt3.99□□□□□ -1.77
SSM4P40318 GRX7YBR014C 612 nt3.99□□□□□ -1.77
SSM4P40318 CAF120YNL278W 3183 nt3.99□□□□□ -1.77
SSM4P40318 YPL150WYPL150W 2706 nt3.99□□□□□ -1.77
SSM4P40318 YML096WYML096W 1578 nt3.99□□□□□ -1.77
SSM4P40318 TFC4YGR047C 3078 nt3.99□□□□□ -1.77
SSM4P40318 OST5YGL226C-A 261 nt3.98□□□□□ -1.77
SSM4P40318 SCM4YGR049W 564 nt3.98□□□□□ -1.77
SSM4P40318 YGR114CYGR114C 390 nt3.98□□□□□ -1.77
SSM4P40318 RPS22AYJL190C 393 nt3.98□□□□□ -1.77
SSM4P40318 EMC2YJR088C 879 nt3.98□□□□□ -1.77
SSM4P40318 NMA111YNL123W 2994 nt3.98□□□□□ -1.77
SSM4P40318 MSN1YOL116W 1149 nt3.98□□□□□ -1.77
SSM4P40318 YOR366WYOR366W 354 nt3.98□□□□□ -1.77
SSM4P40318 ITC1YGL133W 3795 nt3.98□□□□□ -1.77
SSM4P40318 RRP5YMR229C 5190 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms