Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK1BO75841 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UPK1BO75841 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK1BO75841 AC027702.1-201ENST00000563810 1770 ntBASIC18.47■□□□□ 0.55
UPK1BO75841 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK1BO75841 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPK1BO75841 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPK1BO75841 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 AL162393.1-201ENST00000437852 946 ntBASIC18.47■□□□□ 0.55
UPK1BO75841 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPK1BO75841 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK1BO75841 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
UPK1BO75841 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.46■□□□□ 0.55
UPK1BO75841 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
UPK1BO75841 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK1BO75841 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK1BO75841 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
UPK1BO75841 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.46■□□□□ 0.54
UPK1BO75841 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPK1BO75841 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.45■□□□□ 0.54
UPK1BO75841 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
UPK1BO75841 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPK1BO75841 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 LINC01529-204ENST00000636474 1715 ntBASIC18.45■□□□□ 0.54
UPK1BO75841 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK1BO75841 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK1BO75841 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPK1BO75841 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 AC020907.5-201ENST00000624372 1936 ntBASIC18.45■□□□□ 0.54
UPK1BO75841 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK1BO75841 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.44■□□□□ 0.54
UPK1BO75841 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.44■□□□□ 0.54
UPK1BO75841 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.44■□□□□ 0.54
UPK1BO75841 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 RPS2P7-201ENST00000447334 885 ntBASIC18.44■□□□□ 0.54
UPK1BO75841 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.44■□□□□ 0.54
UPK1BO75841 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.44■□□□□ 0.54
UPK1BO75841 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.44■□□□□ 0.54
UPK1BO75841 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.44■□□□□ 0.54
UPK1BO75841 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK1BO75841 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.44■□□□□ 0.54
UPK1BO75841 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms