Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 RPS20-212ENST00000618656 627 ntTSL 3 BASIC10.7□□□□□ -0.71e-323■■■■□ 26.7
DKC1O60832 RPS20-207ENST00000520627 423 ntTSL 5 BASIC10.53□□□□□ -0.721e-323■■■■□ 26.7
DKC1O60832 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.871e-323■■■■□ 26.7
DKC1O60832 RPS20-204ENST00000519606 424 ntTSL 3 BASIC9.63□□□□□ -0.871e-323■■■■□ 26.7
DKC1O60832 RPS20-206ENST00000520490 402 ntTSL 39.15□□□□□ -0.941e-323■■■■□ 26.7
DKC1O60832 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.59□□□□□ -1.031e-323■■■■□ 26.7
DKC1O60832 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.13□□□□□ -1.111e-323■■■■□ 26.7
DKC1O60832 SNORD54-201ENST00000459159 67 ntBASIC-2.07□□□□□ -2.741e-323■■■■□ 26.7
DKC1O60832 PVT1-204ENST00000517525 392 ntTSL 327.69■■■□□ 2.027e-7■■■■□ 26.6
DKC1O60832 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.05■■□□□ 1.927e-7■■■■□ 26.6
DKC1O60832 BCL7A-202ENST00000432926 871 ntTSL 225.43■■□□□ 1.661e-15■■■■□ 26.6
DKC1O60832 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.11e-15■■■■□ 26.6
DKC1O60832 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.81■□□□□ 0.921e-15■■■■□ 26.6
DKC1O60832 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.62■■□□□ 1.694e-7■■■■□ 26.6
DKC1O60832 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.824e-7■■■■□ 26.6
DKC1O60832 AK3-204ENST00000611749 4029 ntTSL 4 BASIC10.82□□□□□ -0.684e-7■■■■□ 26.6
DKC1O60832 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.88□□□□□ -1.154e-7■■■■□ 26.6
DKC1O60832 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.13e-6■■■■□ 26.6
DKC1O60832 FARP1-205ENST00000457029 602 ntTSL 59.64□□□□□ -0.876e-8■■■■□ 26.5
DKC1O60832 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.712e-6■■■■□ 26.5
DKC1O60832 SDF4-205ENST00000465727 2095 ntTSL 220.49■□□□□ 0.872e-6■■■■□ 26.5
DKC1O60832 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.872e-6■■■■□ 26.5
DKC1O60832 SDF4-203ENST00000403997 728 ntTSL 314.94□□□□□ -0.022e-6■■■■□ 26.5
DKC1O60832 UBAP2-206ENST00000412543 1349 ntTSL 57.7□□□□□ -1.188e-79■■■■□ 26.5
DKC1O60832 UBAP2-207ENST00000421278 833 ntTSL 55.48□□□□□ -1.538e-79■■■■□ 26.5
DKC1O60832 PRRC2B-201ENST00000320547 4950 ntTSL 213.74□□□□□ -0.211e-7■■■■□ 26.4
DKC1O60832 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.3□□□□□ -1.44e-7■■■■□ 26.4
DKC1O60832 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC9.28□□□□□ -0.921e-323■■■■□ 26.4
DKC1O60832 snoR1.1-201ENST00000628177 80 ntBASIC-1.22□□□□□ -2.61e-323■■■■□ 26.4
DKC1O60832 SNORD60-201ENST00000383903 83 ntBASIC-2.81□□□□□ -2.861e-323■■■■□ 26.4
DKC1O60832 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.2■■■□□ 2.11e-323■■■■□ 26.4
DKC1O60832 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC13.74□□□□□ -0.211e-323■■■■□ 26.4
DKC1O60832 TPT1-207ENST00000490277 1851 ntTSL 210.02□□□□□ -0.811e-323■■■■□ 26.4
DKC1O60832 TPT1-206ENST00000484604 794 ntTSL 28.95□□□□□ -0.981e-323■■■■□ 26.4
DKC1O60832 TPT1-209ENST00000528619 731 ntTSL 27.68□□□□□ -1.181e-323■■■■□ 26.4
DKC1O60832 TPT1-210ENST00000529421 801 ntTSL 37.37□□□□□ -1.231e-323■■■■□ 26.4
DKC1O60832 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.81□□□□□ -1.321e-323■■■■□ 26.4
DKC1O60832 TPT1-211ENST00000530245 530 ntTSL 35.83□□□□□ -1.481e-323■■■■□ 26.4
DKC1O60832 SNORA31-201ENST00000362607 130 ntBASIC4.29□□□□□ -1.721e-323■■■■□ 26.4
DKC1O60832 TPT1-213ENST00000533567 594 ntTSL 34.21□□□□□ -1.741e-323■■■■□ 26.4
DKC1O60832 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.035e-6■■■■□ 26.4
DKC1O60832 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.275e-6■■■■□ 26.4
DKC1O60832 NOL11-209ENST00000583108 2071 ntTSL 210.62□□□□□ -0.711e-323■■■■□ 26.4
DKC1O60832 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.781e-323■■■■□ 26.4
DKC1O60832 NOL11-206ENST00000581375 2448 ntTSL 28.04□□□□□ -1.121e-323■■■■□ 26.4
DKC1O60832 SNORA38B-201ENST00000363524 131 ntBASIC7.5□□□□□ -1.211e-323■■■■□ 26.4
DKC1O60832 NOL11-208ENST00000583021 443 ntTSL 24.39□□□□□ -1.711e-323■■■■□ 26.4
DKC1O60832 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.283e-20■■■■□ 26.3
DKC1O60832 CRYBB2P1-203ENST00000415709 538 ntBASIC4.16□□□□□ -1.748e-10■■■■□ 26.3
DKC1O60832 C19orf48-207ENST00000596655 1639 ntTSL 220.96■□□□□ 0.952e-11■■■■□ 26.2
DKC1O60832 C19orf48-212ENST00000600373 709 ntTSL 215.17■□□□□ 0.022e-11■■■■□ 26.2
DKC1O60832 SNORD88B-201ENST00000408454 91 ntBASIC14.6□□□□□ -0.072e-11■■■■□ 26.2
DKC1O60832 C19orf48-205ENST00000596287 827 ntTSL 212.93□□□□□ -0.342e-11■■■■□ 26.2
DKC1O60832 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.52■■□□□ 1.522e-9■■■■□ 26.2
DKC1O60832 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.422e-9■■■■□ 26.2
DKC1O60832 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.35■■□□□ 1.332e-9■■■■□ 26.2
DKC1O60832 UCHL5-203ENST00000367450 1355 ntTSL 521.72■■□□□ 1.072e-9■■■■□ 26.2
DKC1O60832 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.012e-9■■■■□ 26.2
DKC1O60832 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.482e-9■■■■□ 26.2
DKC1O60832 UCHL5-208ENST00000417752 577 ntTSL 516.67■□□□□ 0.262e-9■■■■□ 26.2
DKC1O60832 UCHL5-210ENST00000421683 834 ntTSL 311.75□□□□□ -0.532e-9■■■■□ 26.2
DKC1O60832 UCHL5-213ENST00000483156 417 ntTSL 25.97□□□□□ -1.452e-9■■■■□ 26.2
DKC1O60832 SCARNA18B-201ENST00000458806 135 ntBASIC-1.23□□□□□ -2.612e-9■■■■□ 26.2
DKC1O60832 STAU1-208ENST00000437404 1085 ntTSL 1 (best)23.08■■□□□ 1.299e-11■■■■□ 26.2
DKC1O60832 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.852e-25■■■■□ 26.2
DKC1O60832 NPLOC4-207ENST00000572346 567 ntTSL 416.49■□□□□ 0.232e-25■■■■□ 26.2
DKC1O60832 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.31■□□□□ 0.22e-25■■■■□ 26.2
DKC1O60832 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC14.49□□□□□ -0.092e-25■■■■□ 26.2
DKC1O60832 NPLOC4-213ENST00000573519 654 ntTSL 1 (best)14.25□□□□□ -0.132e-25■■■■□ 26.2
DKC1O60832 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC13.47□□□□□ -0.252e-25■■■■□ 26.2
DKC1O60832 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.49e-11■■■■□ 26.2
DKC1O60832 NPLOC4-206ENST00000571714 676 ntTSL 512.41□□□□□ -0.422e-25■■■■□ 26.2
DKC1O60832 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.469e-11■■■■□ 26.2
DKC1O60832 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.569e-11■■■■□ 26.2
DKC1O60832 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.569e-11■■■■□ 26.2
DKC1O60832 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.599e-11■■■■□ 26.2
DKC1O60832 NPLOC4-219ENST00000576713 571 ntTSL 510.52□□□□□ -0.732e-25■■■■□ 26.2
DKC1O60832 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.739e-11■■■■□ 26.2
DKC1O60832 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.759e-11■■■■□ 26.2
DKC1O60832 NPLOC4-210ENST00000572824 559 ntTSL 410.19□□□□□ -0.782e-25■■■■□ 26.2
DKC1O60832 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.89e-11■■■■□ 26.2
DKC1O60832 NPLOC4-211ENST00000573212 564 ntTSL 49.03□□□□□ -0.962e-25■■■■□ 26.2
DKC1O60832 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.562e-30■■■■□ 26.1
DKC1O60832 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.552e-30■■■■□ 26.1
DKC1O60832 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.228e-13■■■■□ 25.9
DKC1O60832 FAM129B-207ENST00000484348 654 ntTSL 1 (best)25.8■■□□□ 1.722e-6■■■■□ 25.9
DKC1O60832 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■■■□ 25.9
DKC1O60832 FAM129B-204ENST00000468379 828 ntTSL 315.97■□□□□ 0.152e-6■■■■□ 25.9
DKC1O60832 FAM129B-206ENST00000478917 362 ntTSL 515.74■□□□□ 0.112e-6■■■■□ 25.9
DKC1O60832 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.15■□□□□ 0.022e-6■■■■□ 25.9
DKC1O60832 NFIC-211ENST00000641145 8399 ntBASIC17.99■□□□□ 0.471e-6■■■■□ 25.9
DKC1O60832 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.66■□□□□ 0.421e-6■■■■□ 25.9
DKC1O60832 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.29■□□□□ 0.21e-6■■■■□ 25.9
DKC1O60832 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.39■□□□□ 0.051e-6■■■■□ 25.9
DKC1O60832 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.422e-8■■■■□ 25.8
DKC1O60832 CISD1-202ENST00000464703 698 ntTSL 54.45□□□□□ -1.72e-8■■■■□ 25.8
DKC1O60832 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.22■■■■□ 3.394e-15■■■■□ 25.7
DKC1O60832 SALL1-203ENST00000562674 407 ntTSL 335.08■■■■□ 3.211e-5■■■■□ 25.7
DKC1O60832 ZNF740-204ENST00000552593 966 ntTSL 328.11■■■□□ 2.091e-5■■■■□ 25.7
DKC1O60832 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.04■■□□□ 1.921e-5■■■■□ 25.7
Retrieved 100 of 8,567 protein–RNA pairs in 148.1 ms