Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
FOXN3O00409 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN3O00409 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN3O00409 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN3O00409 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXN3O00409 AL354811.1-201ENST00000610286 706 ntBASIC22.67■■□□□ 1.22
FOXN3O00409 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN3O00409 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN3O00409 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN3O00409 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXN3O00409 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN3O00409 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXN3O00409 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXN3O00409 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXN3O00409 IRS3P-201ENST00000223076 1006 ntBASIC22.66■■□□□ 1.22
FOXN3O00409 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN3O00409 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 TPRG1LP1-201ENST00000598702 760 ntBASIC22.66■■□□□ 1.22
FOXN3O00409 MIR6084-201ENST00000622012 110 ntBASIC22.66■■□□□ 1.22
FOXN3O00409 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN3O00409 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FOXN3O00409 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN3O00409 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN3O00409 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN3O00409 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN3O00409 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.65■■□□□ 1.22
FOXN3O00409 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXN3O00409 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXN3O00409 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXN3O00409 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
FOXN3O00409 AL358852.1-201ENST00000623174 1268 ntBASIC22.65■■□□□ 1.22
FOXN3O00409 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXN3O00409 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN3O00409 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
FOXN3O00409 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN3O00409 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXN3O00409 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXN3O00409 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN3O00409 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN3O00409 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
FOXN3O00409 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXN3O00409 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
FOXN3O00409 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
FOXN3O00409 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
FOXN3O00409 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN3O00409 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.63■■□□□ 1.21
FOXN3O00409 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXN3O00409 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.62■■□□□ 1.21
FOXN3O00409 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
FOXN3O00409 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.62■■□□□ 1.21
FOXN3O00409 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.62■■□□□ 1.21
FOXN3O00409 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.62■■□□□ 1.21
FOXN3O00409 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN3O00409 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.61■■□□□ 1.21
FOXN3O00409 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN3O00409 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN3O00409 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN3O00409 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN3O00409 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN3O00409 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
FOXN3O00409 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.61■■□□□ 1.21
FOXN3O00409 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.61■■□□□ 1.21
FOXN3O00409 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN3O00409 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN3O00409 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN3O00409 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN3O00409 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN3O00409 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN3O00409 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.6■■□□□ 1.21
FOXN3O00409 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms