Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CCDC194A0A1B0GVG4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L2-201ENST00000561772 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L6-201ENST00000626483 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L1-201ENST00000627662 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L8-201ENST00000629013 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L3-201ENST00000630187 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L7-201ENST00000630678 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 DUX4L5-201ENST00000630834 1275 ntBASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC194A0A1B0GVG4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 AC034268.1-201ENST00000441047 882 ntBASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 EEF1DP3-203ENST00000566025 782 ntBASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC194A0A1B0GVG4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 AC053503.5-201ENST00000601508 636 ntBASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC194A0A1B0GVG4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC194A0A1B0GVG4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CCDC194A0A1B0GVG4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC194A0A1B0GVG4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms