Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138Q9CQE0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf138Q9CQE0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138Q9CQE0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf138Q9CQE0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf138Q9CQE0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf138Q9CQE0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf138Q9CQE0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138Q9CQE0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.39
Rnf138Q9CQE0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138Q9CQE0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138Q9CQE0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rnf138Q9CQE0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Gm2399-201ENSMUST00000104944 225 ntBASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Gm11249-201ENSMUST00000117071 859 ntBASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138Q9CQE0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138Q9CQE0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138Q9CQE0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.47■□□□□ 0.39
Rnf138Q9CQE0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138Q9CQE0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138Q9CQE0 Gm22240-201ENSMUST00000175225 82 ntBASIC17.46■□□□□ 0.39
Rnf138Q9CQE0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138Q9CQE0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138Q9CQE0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms