Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 AC022517.1-201ENST00000592429 346 ntBASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC01555Q8NAE3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 KRT19P1-201ENST00000405746 1186 ntBASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 AC104564.3-201ENST00000582367 638 ntBASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC01555Q8NAE3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 LINC00565-201ENST00000562710 2331 ntBASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 AC138907.5-202ENST00000569484 235 ntBASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC01555Q8NAE3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 AP001160.3-201ENST00000601484 763 ntBASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC01555Q8NAE3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 AC010141.2-201ENST00000452426 721 ntBASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC01555Q8NAE3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms