Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.44■□□□□ 0.54
Lrif1Q8CDD9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.44■□□□□ 0.54
Lrif1Q8CDD9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrif1Q8CDD9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrif1Q8CDD9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrif1Q8CDD9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrif1Q8CDD9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Lrif1Q8CDD9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.41■□□□□ 0.54
Lrif1Q8CDD9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrif1Q8CDD9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.39■□□□□ 0.54
Lrif1Q8CDD9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lrif1Q8CDD9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrif1Q8CDD9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrif1Q8CDD9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrif1Q8CDD9 Fst-202ENSMUST00000223640 2612 ntBASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.36■□□□□ 0.53
Lrif1Q8CDD9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms