Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Alx1Q8C8B0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Alx1Q8C8B0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.91■■□□□ 1.1
Alx1Q8C8B0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.91■■□□□ 1.1
Alx1Q8C8B0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.91■■□□□ 1.1
Alx1Q8C8B0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Gm29257-201ENSMUST00000186115 639 ntBASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Alx1Q8C8B0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Alx1Q8C8B0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.89■■□□□ 1.1
Alx1Q8C8B0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Alx1Q8C8B0 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Alx1Q8C8B0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Alx1Q8C8B0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.88■■□□□ 1.09
Alx1Q8C8B0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Alx1Q8C8B0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Alx1Q8C8B0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Gm4968-201ENSMUST00000071458 858 ntBASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alx1Q8C8B0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.86■■□□□ 1.09
Alx1Q8C8B0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alx1Q8C8B0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Iqck-206ENSMUST00000208658 2891 ntBASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alx1Q8C8B0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms