Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 EDA-201ENST00000338901 1233 ntBASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 AC099791.1-201ENST00000416440 715 ntBASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 AC133561.4-201ENST00000566112 224 ntBASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.11■□□□□ 0.33
VMA21Q3ZAQ7 Z98882.1-201ENST00000622160 2253 ntBASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 SMUG1P1-201ENST00000590640 811 ntBASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.1■□□□□ 0.33
VMA21Q3ZAQ7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 AC026310.3-201ENST00000625186 2373 ntBASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VMA21Q3ZAQ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VMA21Q3ZAQ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 AP006587.3-201ENST00000525742 1516 ntBASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 AL355001.2-201ENST00000620617 1191 ntBASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.08■□□□□ 0.32
VMA21Q3ZAQ7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 AIRN-201ENST00000601203 4374 ntBASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 TSPY26P-201ENST00000476365 1326 ntBASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.07■□□□□ 0.32
VMA21Q3ZAQ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VMA21Q3ZAQ7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VMA21Q3ZAQ7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VMA21Q3ZAQ7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms