Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.75■□□□□ 0.75
Trim43aQ3TL54 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43aQ3TL54 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43aQ3TL54 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43aQ3TL54 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.72■□□□□ 0.75
Trim43aQ3TL54 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Gm45417-201ENSMUST00000209533 758 ntBASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43aQ3TL54 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim43aQ3TL54 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms