Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Thumpd3P97770 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Thumpd3P97770 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Gm40848-201ENSMUST00000221998 324 ntBASIC18.96■□□□□ 0.63
Thumpd3P97770 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Thumpd3P97770 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.96■□□□□ 0.63
Thumpd3P97770 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Thumpd3P97770 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd3P97770 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.95■□□□□ 0.62
Thumpd3P97770 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.95■□□□□ 0.62
Thumpd3P97770 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Thumpd3P97770 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd3P97770 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Thumpd3P97770 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Thumpd3P97770 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Thumpd3P97770 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd3P97770 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd3P97770 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Thumpd3P97770 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Thumpd3P97770 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Thumpd3P97770 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd3P97770 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.93■□□□□ 0.62
Thumpd3P97770 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Thumpd3P97770 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd3P97770 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd3P97770 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Thumpd3P97770 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.92■□□□□ 0.62
Thumpd3P97770 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd3P97770 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Thumpd3P97770 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd3P97770 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd3P97770 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd3P97770 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Thumpd3P97770 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd3P97770 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Thumpd3P97770 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.91■□□□□ 0.62
Thumpd3P97770 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Thumpd3P97770 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Thumpd3P97770 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd3P97770 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Thumpd3P97770 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.9■□□□□ 0.62
Thumpd3P97770 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.9■□□□□ 0.62
Thumpd3P97770 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Thumpd3P97770 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd3P97770 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Thumpd3P97770 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms