Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.24■□□□□ 0.35
Cacna1aP97445 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1aP97445 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.24■□□□□ 0.35
Cacna1aP97445 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cacna1aP97445 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.23■□□□□ 0.35
Cacna1aP97445 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Cacna1aP97445 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1aP97445 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1aP97445 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.22■□□□□ 0.35
Cacna1aP97445 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cacna1aP97445 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1aP97445 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cacna1aP97445 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1aP97445 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1aP97445 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.22■□□□□ 0.35
Cacna1aP97445 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1aP97445 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1aP97445 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cacna1aP97445 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.21■□□□□ 0.35
Cacna1aP97445 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.21■□□□□ 0.35
Cacna1aP97445 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cacna1aP97445 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.21■□□□□ 0.35
Cacna1aP97445 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1aP97445 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1aP97445 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1aP97445 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1aP97445 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.2■□□□□ 0.34
Cacna1aP97445 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.2■□□□□ 0.34
Cacna1aP97445 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1aP97445 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna1aP97445 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.19■□□□□ 0.34
Cacna1aP97445 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.19■□□□□ 0.34
Cacna1aP97445 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Gm5867-201ENSMUST00000063197 592 ntBASIC17.19■□□□□ 0.34
Cacna1aP97445 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cacna1aP97445 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cacna1aP97445 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacna1aP97445 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.19■□□□□ 0.34
Cacna1aP97445 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.19■□□□□ 0.34
Cacna1aP97445 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1aP97445 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms